D008ped. Atlantic salmon pedigree

The data file can be downloaded here:

This data file contains the pedigree information associated with the D008 dataset. The columns correspond to the individual unique identifier (indiv), the male parent (sire), and the female parent (dam) (Robledo et al. 2018).

d008ped <- read.table(here::here("data", "SALMON_PED.txt"), header = TRUE)

indiv	sire	dam
Sire1	0	0
Sire2	0	0
Sire3	0	0
Sire4	0	0
Sire5	0	0
Sire6	0	0
Sire7	0	0
Sire8	0	0

Robledo, D., O. Matika, A. Hamilton, and R. D. Houston. 2018. Genome-wide association and genomic selection for resistance to amoebic gill disease in Atlantic salmon. G3: Genes, Genomes, Genetics. 8(4):1195–1203.